| Fish |   |   | 
| Hardhead (Mylopharodon conocephalus) |   | CSC | 
| Amphibians |   |   | 
| Mount Lyell salamander (Hydromantes platycephalus) |   | CSC | 
| Yosemite toad (Anaxyrus canorus) | FT | CSC | 
| Foothill yellow-legged frog (Rana boylii)* |   | CT | 
| Sierra Nevada yellow-legged frog (Rana sierrae) | FE | CT | 
| California red-legged frog (Rana draytonii) | FT |  | 
| Reptiles |   |   | 
| Western pond turtle (Actinemys marmorata) |   | CSC | 
| Birds |   |   | 
| Harlequin duck (Histrionicus histrionicus) |   | CSC | 
| Northern goshawk (Accipiter gentilis) |   | CSC | 
| Northern harrier (Circus cyaneus) |  | CSC | 
| Golden eagle (Aquila chrysaetos) |  | CFP | 
| Bald eagle (Haliaeetus leucocephalus) |   | CE, CFP | 
| Peregrine falcon (Falco peregrinus) |   | CFP | 
| Long-eared owl (Asio otus) |   | CSC | 
| Great gray owl (Strix nebulosa) |   | CE | 
| California spotted owl (Strix occidentalis occidentalis) |   | CSC | 
| Vaux's swift (Chaetura vauxi) |   | CSC | 
| Black swift (Cyseloides niger) |   | CSC | 
| Olive-sided flycatcher (Contopus cooperi) |   | CSC | 
| Willow flycatcher (Empidonax trailii) |   | CE | 
| Yellow warbler (Setophaga petechia) |   | CSC | 
| Mammals |   |   | 
| Mount Lyell shrew (Sorex lyelli) |   | CSC | 
| Pallid bat (Antrozous pallidus) |   | CSC | 
| Townsend's big-eared bat (Corynorhinus townsendii) |   | CSC | 
| Spotted bat (Euderma maculatum) |   | CSC | 
| Western red bat (Lasiurus blossevillii) |   | CSC | 
| Western mastiff bat (Eumops perotis) |   | CSC | 
| Sierra Nevada snowshoe hare (Lepus americanus tahoensis) |   | CSC | 
| Western white-tailed jackrabbit (Lepus townsendii) |   | CSC | 
| Sierra Nevada mountain beaver (Aplodontia rufa) |   | CSC | 
| Sierra Nevada red fox (Vulpes vulpes necator) | FE | CT | 
| California wolverine (Gulo gulo) | FPT | CT | 
| Fisher (Pekania pennanti) Southern Sierra Nevada population** | FE | CT | 
| American badger (Taxidea taxus) |   | CSC | 
| Sierra Nevada bighorn sheep (Ovis Canadensis sierrae) | FE | CE, CFP | 
| Ringtail (Bassariscus astutus) |  | CFP |